STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
cbiDCobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A. (351 aa)    
Predicted Functional Partners:
KXB65196.1
KEGG: aoe:Clos_1018 6.1e-35 precorrin-6Y C5,15-methyltransferase subunit CbiT; K02191 cobalt-precorrin-7 (C15)-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.996
KXB65194.1
CbiG protein; KEGG: cbm:CBF_1007 6.2e-49 cbiG; cobalamin biosynthesis protein CbiG; K02189 cobalt-precorrin 5A hydrolase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.993
KXB65192.1
KEGG: aoe:Clos_1022 2.8e-37 precorrin-6x reductase; K05895 precorrin-6X reductase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.992
KXB65195.1
KEGG: aoe:Clos_1019 1.2e-77 precorrin-4 C(11)-methyltransferase K05936; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.990
KXB65197.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: tde:TDE2373 2.0e-27 precorrin-6Y C5,15-methyltransferase; K03399 precorrin-6Y C5,15-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
 
 0.990
KXB65193.1
KEGG: aoe:Clos_1021 5.7e-71 precorrin-3B C(17)-methyltransferase; K05934 precorrin-3B C17-methyltransferase; Psort location: Cytoplasmic, score: 9.97.
 
 
 0.989
KXB65199.1
KEGG: tde:TDE2555 4.5e-55 cobH; precorrin-8X methylmutase; K06042 precorrin-8X methylmutase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.984
KXB65201.1
Putative precorrin-2 C(20)-methyltransferase; KEGG: aoe:Clos_1023 1.3e-34 uroporphyrin-III C/tetrapyrrole methyltransferase; K03394 precorrin-2/cobalt-factor-2 C20-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.967
KXB65202.1
Cobalt chelatase; KEGG: has:Halsa_2198 1.4e-33 precorrin-4 C(11)-methyltransferase; Psort location: Cytoplasmic, score: 8.96.
 
  
 0.942
cobD
Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
 
  
 0.888
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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