STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65218.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.96. (274 aa)    
Predicted Functional Partners:
KXB65217.1
KEGG: cba:CLB_1427 3.8e-81 polar amino acid ABC transporter ATP-binding protein; K02028 polar amino acid transport system ATP-binding protein; Psort location: CytoplasmicMembrane, score: 7.88.
       0.773
KXB65219.1
Putative arginine ABC transporter, permease protein ArtQ; KEGG: bde:BDP_0786 3.1e-31 ABC transporter permease K02029:K02030; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB65220.1
Phage prohead protease, HK97 family; KEGG: eci:UTI89_C2121 6.0e-28 fliY; cystine transporter subunit K02424; Psort location: Periplasmic, score: 9.76.
       0.620
KXB65216.1
KEGG: sab:SAB1245c 1.1e-11 phosphate-binding lipoprotein K02040.
       0.425
KXB68362.1
2-hydroxyglutaryl-CoA dehydratase, D-component; KEGG: awo:Awo_c08270 6.3e-120 hgdB; 2-hydroxyglutaryl-CoA dehydratase beta subunit HgdB; Psort location: Cytoplasmic, score: 8.96.
  
     0.418
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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