STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65230.1comEA protein; Psort location: CytoplasmicMembrane, score: 9.82. (199 aa)    
Predicted Functional Partners:
KXB65233.1
Cell envelope-like function transcriptional attenuator common domain protein; Psort location: CytoplasmicMembrane, score: 7.88.
 
     0.857
rsfS
Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.808
KXB65231.1
Putative endoribonuclease L-PSP; KEGG: zga:zobellia_3738 3.4e-25 endoribonuclease K07567; Psort location: Cytoplasmic, score: 9.97.
       0.773
KXB64993.1
Bacterial type II secretion system protein F domain protein; KEGG: pfe:PSF113_5005 4.5e-30 pilC; protein PilC K02653; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.724
KXB65234.1
Hydrolase, HD family; KEGG: bya:BANAU_2545 1.5e-22 yqeK; 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Psort location: Cytoplasmic, score: 8.96.
       0.710
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.710
KXB65236.1
RNA-binding protein, YhbY family.
       0.710
obg
Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.
       0.710
KXB64992.1
Putative general secretory pathway protein E; KEGG: cco:CCC13826_1231 7.9e-81 L(+)-tartrate dehydratase subunit beta (L-TTD beta) K02454; Psort location: Cytoplasmic, score: 9.97.
  
  
 0.689
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.689
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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