STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB65246.1Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. (279 aa)    
Predicted Functional Partners:
KXB65244.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: adg:Adeg_1537 5.7e-84 penicillin-binding protein 2 K05515; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.972
KXB65247.1
KEGG: apb:SAR116_0666 2.2e-14 DNA repair protein RadC K03630; Psort location: Cytoplasmic, score: 9.97; Belongs to the UPF0758 family.
  
  
 0.906
KXB65248.1
Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
  
  
 0.849
KXB66623.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: aoe:Clos_1373 8.6e-107 peptidoglycan glycosyltransferase K08384; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.816
KXB65242.1
Radical SAM-linked protein; KEGG: sat:SYN_01355 4.0e-11 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 8.96.
 
     0.776
KXB65245.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.773
KXB65042.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: aoe:Clos_2576 2.0e-100 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.763
KXB65243.1
Radical SAM domain protein; KEGG: ctc:CTC02064 3.1e-189 Fe-S oxidoreductase K03423; Psort location: Cytoplasmic, score: 8.96.
 
     0.758
KXB65241.1
S1 RNA binding domain protein; KEGG: pmx:PERMA_0998 7.1e-41 ribonuclease G K08301; Psort location: Cytoplasmic, score: 9.97.
       0.732
KXB65250.1
KEGG: sth:STH903 4.5e-08 hypothetical protein; K00805 heptaprenyl diphosphate synthase.
  
    0.716
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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