STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64880.1Methyltransferase domain protein; KEGG: pca:Pcar_2227 3.7e-19 SAM-dependent methyltransferase; K15460 tRNA1Val (adenine37-N6)-methyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the methyltransferase superfamily. (217 aa)    
Predicted Functional Partners:
rsmI
S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
    0.891
KXB64882.1
NurA domain protein; Psort location: Cytoplasmic, score: 8.96.
       0.811
KXB64883.1
Hypothetical protein; KEGG: ova:OBV_26790 2.0e-21 putative 5'-nucleotidase.
       0.680
KXB64884.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.675
tmcAL
Cytidyltransferase domain protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
 
     0.641
KXB64879.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.636
KXB65038.1
GIY-YIG catalytic domain protein; KEGG: apb:SAR116_2460 7.6e-12 Excinuclease ABC subunit C domain-containing protein K07461.
  
  
 0.530
KXB64877.1
Phospholipase D domain protein; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
       0.509
KXB64878.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.507
KXB64885.1
Nicotinamide mononucleotide transporter PnuC; KEGG: hip:CGSHiEE_06685 7.7e-09 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K03811; Psort location: CytoplasmicMembrane, score: 10.00.
       0.494
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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