STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64897.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.82. (51 aa)    
Predicted Functional Partners:
KXB64895.1
Hypothetical protein.
       0.752
KXB64896.1
SNARE-like domain protein; Psort location: CytoplasmicMembrane, score: 9.82.
       0.752
KXB64894.1
RelA/SpoT domain protein; KEGG: awo:Awo_c04100 8.2e-47 spoT; GTP pyrophosphokinase SpoT; Psort location: Cytoplasmic, score: 8.96.
       0.726
KXB64898.1
EDD domain protein, DegV family; KEGG: mgf:MGF_3873 9.1e-13 DegV-like protein; Psort location: Cytoplasmic, score: 8.96.
       0.662
KXB64892.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
       0.532
KXB64893.1
Radical SAM domain protein; KEGG: dak:DaAHT2_0680 1.8e-06 Arsenite methyltransferase; Psort location: Cytoplasmic, score: 8.96.
       0.532
KXB64899.1
Putative CoA-substrate-specific enzyme activase; KEGG: bbp:BBPR_0457 0. (R)-2-hydroxyglutaryl-CoA dehydratase activator; Psort location: Cytoplasmic, score: 8.96.
       0.472
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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