STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64934.1Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 8.96. (529 aa)    
Predicted Functional Partners:
KXB64936.1
Phage portal protein, HK97 family; Psort location: Cytoplasmic, score: 8.96.
 
   
 0.910
KXB64938.1
Phage major capsid protein, HK97 family; Psort location: Cytoplasmic, score: 8.96.
 
     0.901
KXB64937.1
Endopeptidase Clp; KEGG: tex:Teth514_1253 4.8e-74 peptidase S14, ClpP; K01358 ATP-dependent Clp protease, protease subunit; Psort location: Cytoplasmic, score: 9.26.
 
     0.885
KXB64925.1
HNH endonuclease domain protein; KEGG: eco:b1159 5.3e-05 mcrA; e14 prophage; 5-methylcytosine-specific restriction endonuclease B K07451.
 
  
 0.859
KXB64926.1
Hypothetical protein.
 
     0.853
KXB64928.1
DNA (cytosine-5-)-methyltransferase; KEGG: efc:EFAU004_01625 4.8e-97 adenine methyltransferase; Psort location: Cytoplasmic, score: 8.96; Belongs to the N(4)/N(6)-methyltransferase family.
 
     0.773
KXB64931.1
Hypothetical protein.
 
     0.772
KXB64952.1
Toxin secretion/phage lysis holin; KEGG: cao:Celal_1006 0.0021 xenobiotic-transporting ATPase K11085; Psort location: CytoplasmicMembrane, score: 9.82.
 
   
 0.706
KXB64939.1
Phage DNA packaging protein.
 
     0.678
KXB64941.1
Hypothetical protein; KEGG: tme:Tmel_1511 0.00072 NAD-dependent DNA ligase K01972; Psort location: Cytoplasmic, score: 8.96.
 
     0.636
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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