STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64935.1Hypothetical protein. (139 aa)    
Predicted Functional Partners:
KXB64936.1
Phage portal protein, HK97 family; Psort location: Cytoplasmic, score: 8.96.
       0.642
KXB64937.1
Endopeptidase Clp; KEGG: tex:Teth514_1253 4.8e-74 peptidase S14, ClpP; K01358 ATP-dependent Clp protease, protease subunit; Psort location: Cytoplasmic, score: 9.26.
       0.642
KXB64938.1
Phage major capsid protein, HK97 family; Psort location: Cytoplasmic, score: 8.96.
       0.642
KXB64939.1
Phage DNA packaging protein.
       0.629
KXB64940.1
Putative phage head-tail adaptor; Psort location: Cytoplasmic, score: 8.96.
       0.629
KXB64941.1
Hypothetical protein; KEGG: tme:Tmel_1511 0.00072 NAD-dependent DNA ligase K01972; Psort location: Cytoplasmic, score: 8.96.
       0.629
KXB64942.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.629
KXB64934.1
Putative phage terminase, large subunit; Psort location: Cytoplasmic, score: 8.96.
       0.628
KXB66263.1
KEGG: efu:HMPREF0351_12109 0.0010 TetR/AcrR family transcriptional regulator; Psort location: Cytoplasmic, score: 8.96.
  
     0.540
KXB65622.1
Hypothetical protein; KEGG: mig:Metig_0622 0.00053 ATP synthase H subunit; K02121 V-type H+-transporting ATPase subunit E.
  
     0.532
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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