STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64953.1Cpl-7 lysozyme protein; KEGG: mcu:HMPREF0573_11206 2.8e-21 N-acetylmuramoyl-L-alanine amidase. (269 aa)    
Predicted Functional Partners:
KXB64947.1
Phage tail tape measure protein, TP901 family; KEGG: bya:BANAU_2143 1.4e-64 SPBc2 prophage-derived transglycosylase.
 
     0.943
KXB64950.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.938
KXB64952.1
Toxin secretion/phage lysis holin; KEGG: cao:Celal_1006 0.0021 xenobiotic-transporting ATPase K11085; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.837
KXB68396.1
Transglycosylase; KEGG: cst:CLOST_1328 1.0e-167 penicillin-binding protein, 1a family; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 9.82.
   
 
 0.835
KXB66634.1
Transglycosylase; KEGG: apr:Apre_1213 2.8e-114 glycosyl transferase family protein; K05366 penicillin-binding protein 1A; Psort location: CytoplasmicMembrane, score: 7.88.
   
 
 0.835
KXB64951.1
Hypothetical protein.
       0.808
KXB64949.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
       0.807
KXB64948.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
 
     0.792
KXB68576.1
N-acetylmuramoyl-L-alanine amidase; KEGG: str:Sterm_1807 1.5e-47 cell wall hydrolase/autolysin; K01448 N-acetylmuramoyl-L-alanine amidase; Psort location: Cytoplasmic, score: 8.96.
  
 0.784
KXB64927.1
Hypothetical protein; KEGG: lki:LKI_07665 7.5e-09 S-adenosylmethionine synthetase K00789; Psort location: Cytoplasmic, score: 8.96.
  
    0.754
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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