STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64713.1Hypothetical protein. (78 aa)    
Predicted Functional Partners:
KXB64714.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
     0.967
rpoB
DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.809
rpoC
DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.805
KXB66559.1
Hypothetical protein.
  
     0.771
KXB64712.1
KEGG: rlt:Rleg2_4805 3.6e-25 MATE efflux family protein; Psort location: CytoplasmicMembrane, score: 10.00.
 
     0.769
KXB65890.1
Hypothetical protein.
  
     0.766
KXB67159.1
Hypothetical protein; KEGG: pfd:PFDG_04257 9.9e-06 hypothetical protein; K01669 deoxyribodipyrimidine photo-lyase.
  
     0.761
KXB65267.1
Bacterial mobilization protein MobC.
  
     0.756
KXB66582.1
Hypothetical protein.
 
     0.755
KXB67157.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.96.
  
     0.753
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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