STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXB64576.1Hypothetical protein; KEGG: bqy:MUS_3285 0.0039 ytmP; putative choline kinase; Psort location: Cytoplasmic, score: 8.96. (174 aa)    
Predicted Functional Partners:
KXB64578.1
Hypothetical protein.
 
     0.879
KXB64579.1
Hypothetical protein; KEGG: ppo:PPM_0588 0.00017 M1-763; beta-lactamase-like protein; Psort location: Cytoplasmic, score: 8.96.
 
     0.860
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.
    
 0.834
KXB65647.1
KEGG: csh:Closa_2452 9.0e-215 homocysteine S-methyltransferase; K00548 5-methyltetrahydrofolate--homocysteine methyltransferase; Psort location: Cytoplasmic, score: 9.97.
    
  0.825
KXB64577.1
Cytidine and deoxycytidylate deaminase zinc-binding region; KEGG: spi:MGAS10750_Spy1706 3.3e-66 Cytidine deaminase K01489.
 
     0.797
KXB65304.1
Putative phage head-tail adaptor; KEGG: dwi:Dwil_GK22102 6.8e-25 GK22102 gene product from transcript GK22102-RA; K00907 myosin-light-chain kinase; Psort location: OuterMembrane, score: 9.52.
  
     0.758
KXB64715.1
rRNA adenine N-6-methyltransferase; KEGG: snp:SPAP_0896 1.9e-127 erm(TR); dimethyladenosine transferase; K00561 23S rRNA (adenine2085-N6)-dimethyltransferase; Psort location: Cytoplasmic, score: 9.97; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
  
     0.707
KXB68559.1
Hypothetical protein; KEGG: pmo:Pmob_0426 2.2e-06 RNA-directed DNA polymerase; K00986 RNA-directed DNA polymerase; Psort location: Cytoplasmic, score: 8.96.
  
     0.651
KXB68170.1
Repeat protein; KEGG: aag:AaeL_AAEL000109 1.3e-13 enolase-phosphatase e-1; K09880 enolase-phosphatase E1; Psort location: Periplasmic, score: 8.56.
  
     0.634
KXB67171.1
Hypothetical protein; KEGG: ddi:DDB_G0274493 1.9e-06 lig1; DNA ligase I; K10747 DNA ligase 1; Psort location: Cytoplasmic, score: 8.96.
  
     0.609
Your Current Organism:
Peptoniphilus coxii
NCBI taxonomy Id: 755172
Other names: ATCC BAA-2106, CCUG 59622, JCM 16892, P. coxii, Peptoniphilus coxii Citron et al. 2013, Peptoniphilus sp. RMA 16757, strain RMA 16757
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