STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52169.1PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyc:PCC7424_3095 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein. (181 aa)    
Predicted Functional Partners:
AFZ52384.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: ter:Tery_3418 pentapeptide repeat-containing protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat.
  
     0.775
AFZ55128.1
PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyc:PCC7424_2972 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein.
  
     0.775
AFZ54407.1
PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: mar:MAE_02140 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: Genome sequencing data, contig C326.
  
     0.773
AFZ53856.1
PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: cyp:PCC8801_2525 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein.
  
     0.632
AFZ52168.1
KEGG: syn:sll0761 hypothetical protein; SPTR: Sll0761 protein.
       0.553
AFZ52170.1
Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain; COGs: COG0383 Alpha-mannosidase; InterPro IPR000602:IPR015341:IPR011682; KEGG: cyh:Cyan8802_3666 alpha-mannosidase; PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, core; Glycoside hydrolase, family 38, central domain; PRIAM: Alpha-mannosidase; SPTR: Putative uncharacterized protein.
       0.531
AFZ52736.1
PFAM: Phage integrase family; InterPro IPR002104; KEGG: cyt:cce_0721 hypothetical protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein.
      
 0.445
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
      
 0.440
proA-2
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
      
 0.440
gyrB
DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
    
 
 0.410
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.