STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52297.1UDP-galactopyranose mutase; PFAM: Flavin containing amine oxidoreductase; Rieske [2Fe-2S] domain; COGs: COG3349 conserved hypothetical protein; InterPro IPR006311:IPR002937:IPR017941; KEGG: syp:SYNPCC7002_A1248 beta-carotene desaturase; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Amine oxidase; SPTR: Beta-carotene desaturase. (639 aa)    
Predicted Functional Partners:
AFZ53350.1
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: cyt:cce_3426 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.932
AFZ52349.1
PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: cyp:PCC8801_1623 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; SPTR: Fatty acid desaturase.
     
 0.909
AFZ54715.1
FAD dependent oxidoreductase; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: mar:MAE_54440 FAD dependent oxidoreductase; SPTR: Similar to tr|Q4BX94|Q4BX94_CROWT Similar to Dehydrogenases.
     
 0.901
AFZ54393.1
Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] domain; COGs: COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenase large terminal subunit; InterPro IPR017941; KEGG: ava:Ava_1827 Rieske (2Fe-2S) region; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) region.
 
   
 0.797
AFZ53466.1
PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: mar:MAE_27940 ABC-2 type transport system permease protein; PFAM: ABC-2 type transporter; SPTR: Putative uncharacterized protein.
 
     0.625
AFZ52954.1
KEGG: cyc:PCC7424_1174 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.612
AFZ55080.1
KEGG: syn:slr1770 hypothetical protein; SPTR: Slr1770 protein.
  
     0.586
AFZ52497.1
KEGG: ava:Ava_3406 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.531
AFZ54422.1
SMC domain protein; TIGRFAM: DNA sulfur modification protein DndD; COGs: COG0419 ATPase involved in DNA repair; InterPro IPR003395; KEGG: cyh:Cyan8802_2920 hypothetical protein; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: Putative uncharacterized protein.
  
     0.484
AFZ53136.1
PFAM: Fatty acid hydroxylase superfamily; short chain dehydrogenase; KEGG: cyt:cce_1989 bifunctional sterol desaturase/short chain dehydrogenase; SPTR: Putative uncharacterized protein.
  
     0.461
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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