STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52317.1PFAM: Protein of unknown function (DUF2993); KEGG: cyc:PCC7424_0188 hypothetical protein; SPTR: Putative uncharacterized protein. (260 aa)    
Predicted Functional Partners:
AFZ52316.1
Lipoprotein LpqB, GerMN domain protein; PFAM: Sporulation and spore germination; COGs: COG5401 Spore germination protein; InterPro IPR019606; KEGG: cyt:cce_3898 hypothetical protein; PFAM: Lipoprotein LpqB, GerMN domain; SPTR: Putative uncharacterized protein.
       0.674
AFZ52315.1
PFAM: Protein of unknown function (DUF3153); KEGG: cyh:Cyan8802_1546 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.509
AFZ52318.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain; Response regulator receiver domain; GGDEF domain; PAS fold; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000160:IPR001789:IPR001610:IPR 001633:IPR013767; KEGG: syn:slr1305 regulatory components of sensory transduction system; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response re [...]
       0.472
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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