STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52452.1TIGRFAM: conserved hypothetical protein; COGs: COG4370 conserved hypothetical protein; InterPro IPR019994; KEGG: cyt:cce_0020 hypothetical protein; SPTR: Similar to tr|P73167|P73167; TIGRFAM: Conserved hypothetical protein CHP03492. (404 aa)    
Predicted Functional Partners:
AFZ52308.1
KEGG: cyt:cce_3390 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.778
AFZ53363.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyh:Cyan8802_0135 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein.
 
     0.674
AFZ52285.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: syn:slr1908 hypothetical protein; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Slr1908 protein; TC 1.B.23; Belongs to the OprB family.
  
     0.665
AFZ52450.1
PFAM: Glycosyl transferases group 1; InterPro IPR001296; KEGG: cyh:Cyan8802_2865 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein.
 
     0.657
AFZ54908.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyt:cce_2027 putative permease YjgP/YjgQ; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein.
 
     0.655
AFZ52451.1
PFAM: Protein of unknown function (DUF565); KEGG: cyh:Cyan8802_1966 protein of unknown function DUF565; SPTR: Putative uncharacterized protein.
       0.608
AFZ53154.1
PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: ava:Ava_2064 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2.
  
     0.595
AFZ54923.1
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cyu:UCYN_03360 nucleoside-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleoside-diphosphate-sugar epimerase.
  
     0.591
AFZ55114.1
PFAM: Cytochrome c; InterPro IPR003088; KEGG: cyh:Cyan8802_2147 cytochrome c class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c class I.
  
     0.580
AFZ53837.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: mar:MAE_10010 porin type major outer membrane protein; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Porin type major outer membrane protein; TC 1.B.23; Belongs to the OprB family.
  
     0.573
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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