STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52676.1Protein of unknown function DUF6 transmembrane; PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: cyc:PCC7424_5346 protein of unknown function DUF6 transmembrane; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Integral membrane protein DUF6. (337 aa)    
Predicted Functional Partners:
AFZ54779.1
Protein of unknown function DUF2232, membrane; PFAM: Predicted membrane protein (DUF2232); COGs: COG4241 membrane protein; InterPro IPR018710; KEGG: cyh:Cyan8802_0917 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative membrane protein.
  
     0.744
AFZ54528.1
PFAM: Protein of unknown function (DUF2996); KEGG: cyc:PCC7424_4979 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.727
AFZ53371.1
PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: cyt:cce_4116 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein.
  
     0.723
AFZ53633.1
PFAM: PRC-barrel domain; InterPro IPR007903; KEGG: mar:MAE_59630 hypothetical protein; PFAM: PRC-barrel; SPTR: Putative uncharacterized protein.
  
     0.717
AFZ52875.1
Ferredoxin thioredoxin reductase beta chain; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.
  
     0.675
AFZ53461.1
30S ribosomal protein 3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.643
AFZ54222.1
PFAM: Protein of unknown function (DUF2488); InterPro IPR019616; KEGG: cyh:Cyan8802_4052 hypothetical protein; PFAM: Protein of unknown function DUF2488; SPTR: Putative uncharacterized protein.
  
     0.635
AFZ52266.1
PFAM: Protein of unknown function (DUF3531); KEGG: syp:SYNPCC7002_A0499 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.627
AFZ53503.1
PFAM: Cobalt transport protein; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: syn:slr1978 hypothetical protein; PFAM: Cobalt transport protein; SPTR: Slr1978 protein.
 
    0.616
AFZ55386.1
PFAM: Glutaredoxin-like domain (DUF836); InterPro IPR008554; KEGG: cyh:Cyan8802_4094 glutaredoxin 2; PFAM: Glutaredoxin 2; SPTR: Glutaredoxin 2.
  
     0.615
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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