STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52787.1KEGG: ter:Tery_0919 hypothetical protein; SPTR: Putative uncharacterized protein. (216 aa)    
Predicted Functional Partners:
AFZ53338.1
KEGG: cyt:cce_4179 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AFZ54463.1
PFAM: Protein of unknown function (DUF3120); KEGG: cyc:PCC7424_4190 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AFZ52340.1
KEGG: mar:MAE_57850 hypothetical protein; SPTR: Similar to tr|Q8YWD9|Q8YWD9.
  
   
 0.769
AFZ55391.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: cyh:Cyan8802_1968 hypothetical protein; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; manually curated.
  
     0.769
AFZ52330.1
COGs: COG1837 RNA-binding protein (contains KH domain); KEGG: cyc:PCC7424_5263 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ54893.1
KEGG: syn:slr1276 hypothetical protein; SPTR: Slr1276 protein.
  
     0.760
AFZ53832.1
KEGG: syp:SYNPCC7002_A2279 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.757
AFZ54906.1
PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: cyu:UCYN_09330 hypothetical protein; PFAM: Organic solvent tolerance-like, N-terminal; SPTR: OstA-like protein.
  
     0.755
AFZ54061.1
KEGG: cyh:Cyan8802_1198 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.753
AFZ52730.1
Hypothetical protein; KEGG: ava:Ava_4934 transmembrane transcriptional regulator (anti-sigma factor); SPTR: Putative Predicted transmembrane transcriptional regulator (Anti-sigma factor).
  
  
 0.752
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.