STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ52884.1PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: cyc:PCC7424_0461 ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; Belongs to the Fur family. (144 aa)    
Predicted Functional Partners:
ribBA
GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
      
 0.921
AFZ54103.1
Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: amr:AM1_3414 iron compound ABC transporter, permease protein, putative; PFAM: Bacterial transport system permease protein; SPTR: Iron compound ABC transporter, permease protein, putative; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
      
 0.917
AFZ55330.1
Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: cyp:PCC8801_3036 transport system permease protein; PFAM: Bacterial transport system permease protein; SPTR: Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
      
 0.917
AFZ55332.1
Transport system permease protein; PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: syp:SYNPCC7002_G0088 iron ABC transporter permease; PFAM: Bacterial transport system permease protein; SPTR: FecCD transport (Permease) family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
      
 0.917
AFZ54387.1
TIGRFAM: ABC exporter membrane fusion protein, DevB family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143:IPR014315; KEGG: cyc:PCC7424_0010 ABC exporter membrane fusion protein, DevB family; PFAM: Secretion protein HlyD; SPTR: ABC exporter membrane fusion protein, DevB family; TIGRFAM: ABC transporter membrane fusion protein, DevB type.
  
   
 0.543
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.527
gatB
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
    
 
 0.485
AFZ52986.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: syp:SYNPCC7002_A1461 membrane-fusion protein; PFAM: Secretion protein HlyD; SPTR: Similar to tr|A0YIP0|A0YIP0_9CYAN Hypothetical protein; TIGRFAM: Secretion protein HlyD.
      
 0.478
AFZ53412.1
PFAM: Bacterial regulatory protein, arsR family; TIGRFAM: iron-sulfur cluster biosynthesis transcriptional regulator SufR; COGs: COG2345 transcriptional regulator protein; InterPro IPR001845:IPR014075; KEGG: cyc:PCC7424_3070 transcriptional regulator, TrmB; PFAM: HTH transcriptional regulator, ArsR; SPTR: Putative uncharacterized protein; TIGRFAM: SUF system FeS cluster assembly, SufR regulator, cyanobacteria.
  
    0.478
AFZ54162.1
TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: mar:MAE_31170 ABC-transporter membrane fusion protein; PFAM: Secretion protein HlyD; SPTR: ABC-transporter membrane fusion protein; TIGRFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
      
 0.478
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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