STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ53188.1PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: cyt:cce_2287 hypothetical protein; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Putative uncharacterized protein; TC 1.B.23; Belongs to the OprB family. (528 aa)    
Predicted Functional Partners:
AFZ53825.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cyn:Cyan7425_3626 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein.
  
   
 0.850
AFZ53368.1
PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: mar:MAE_14730 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Similar to tr|P74182|P74182.
  
   
 0.826
AFZ53661.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
  
     0.757
AFZ52895.1
TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339; KEGG: cyh:Cyan8802_0405 transcriptional regulator, AbrB family; SPTR: Putative uncharacterized protein; TIGRFAM: Transcription regulator AbrB.
  
    0.739
AFZ54908.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyt:cce_2027 putative permease YjgP/YjgQ; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein.
  
     0.722
AFZ53363.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyh:Cyan8802_0135 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein.
  
     0.703
AFZ52619.1
KEGG: cyc:PCC7424_3505 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.700
AFZ52258.1
PFAM: Protein of unknown function (DUF3084); COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: cyh:Cyan8802_2083 uncharacterized protein with the myosin-like domain; SPTR: Uncharacterized protein with the myosin-like domain.
  
     0.697
AFZ53875.1
KEGG: cyh:Cyan8802_2727 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.668
AFZ53828.1
KEGG: cyc:PCC7424_4776 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.665
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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