STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ53363.1PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyh:Cyan8802_0135 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein. (378 aa)    
Predicted Functional Partners:
AFZ54907.1
Sulfate-transporting ATPase; PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: syp:SYNPCC7002_A0769 ABC-type transport protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transport protein.
 
 
 0.994
AFZ54908.1
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: cyt:cce_2027 putative permease YjgP/YjgQ; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein.
  
  
 
0.904
AFZ53186.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyh:Cyan8802_4032 protein of unknown function DUF1239; PFAM: Lipopolysccharide-assembly, LptC-related; SPTR: Putative uncharacterized protein.
  
 
 0.879
AFZ54749.1
PFAM: Surface antigen variable number repeat; POTRA domain, ShlB-type; Surface antigen; TIGRFAM: chloroplast envelope protein translocase, IAP75 family; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR013686:IPR000184; KEGG: cyc:PCC7424_2608 surface antigen (D15); PFAM: Bacterial surface antigen (D15); Surface antigen variable number; Polypeptide-transport-associated, ShlB-type; SPTR: Surface antigen (D15).
 
     0.786
AFZ53661.1
Resolvase RNase H domain protein fold protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.
 
     0.777
AFZ52285.1
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: syn:slr1908 hypothetical protein; PFAM: Carbohydrate-selective porin OprB; S-layer homology domain; SPTR: Slr1908 protein; TC 1.B.23; Belongs to the OprB family.
  
     0.755
lpxD
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.
 
     0.752
lpxA
acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.748
AFZ52258.1
PFAM: Protein of unknown function (DUF3084); COGs: COG4372 Uncharacterized protein with the myosin-like domain; KEGG: cyh:Cyan8802_2083 uncharacterized protein with the myosin-like domain; SPTR: Uncharacterized protein with the myosin-like domain.
 
     0.743
AFZ54847.1
lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
     0.743
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.