STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ53529.1KEGG: syn:sll1268 hypothetical protein; SPTR: Sll1268 protein. (536 aa)    
Predicted Functional Partners:
AFZ52242.1
Hypothetical protein; InterPro IPR012902; KEGG: cyt:cce_3537 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.649
AFZ54787.1
Hypothetical protein; InterPro IPR012902; KEGG: amr:AM1_3319 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.626
AFZ53528.1
KEGG: mar:MAE_53690 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.497
AFZ54786.1
Hypothetical protein; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: syn:slr1929 hypothetical protein; SPTR: Slr1929 protein.
  
  
 0.419
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.