STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ53742.1Hypothetical protein; PFAM: Cytochrome b(N-terminal)/b6/petB; KEGG: mar:MAE_57100 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (237 aa)    
Predicted Functional Partners:
ccsA
Cytochrome c biogenesis protein ccsA; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.
  
  
 0.734
AFZ53743.1
PFAM: NAD dependent epimerase/dehydratase family; InterPro IPR001509; KEGG: hmo:HM1_1142 nad-dependent epimerase/dehydratase domain protein, putative; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nad-dependent epimerase/dehydratase domain protein, putative.
       0.592
AFZ53744.1
UPF0225 protein ychJ; PFAM: SEC-C motif; COGs: COG3012 conserved hypothetical protein; HAMAP: UPF0225 protein ychJ; InterPro IPR004027; KEGG: amr:AM1_1268 SecC motif-containing protein; PFAM: SEC-C motif; SPTR: SEC-C motif domain protein; Belongs to the UPF0225 family.
       0.437
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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