STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ54429.1Ion transport 2 domain protein; PFAM: Ion channel; InterPro IPR013099; KEGG: cyt:cce_2545 hypothetical protein; PFAM: Ion transport 2; SPTR: Putative uncharacterized protein. (217 aa)    
Predicted Functional Partners:
AFZ54469.1
Protein of unknown function DUF2092, periplasmic; PFAM: Predicted periplasmic protein (DUF2092); COGs: COG3900 periplasmic protein; InterPro IPR019207; KEGG: cyh:Cyan8802_2171 putative periplasmic protein; PFAM: Protein of unknown function DUF2092, periplasmic; SPTR: Putative periplasmic protein.
  
     0.738
AFZ54468.1
KEGG: cyh:Cyan8802_2172 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.694
AFZ54470.1
Hypothetical protein; PFAM: Domain of unknown function DUF20; KEGG: cyt:cce_3823 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.577
AFZ54428.1
Ribulose-5-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: syn:sll0807 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase.
       0.442
AFZ55385.1
PFAM: Protein of unknown function (DUF1622); COGs: COG4828 membrane protein; InterPro IPR012427; KEGG: amr:AM1_C0164 hypothetical protein; PFAM: Protein of unknown function DUF1622; SPTR: Putative uncharacterized protein.
  
     0.429
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.