STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ54572.1PFAM: Protein of unknown function, DUF488; KEGG: aba:Acid345_0955 hypothetical protein; SPTR: Putative uncharacterized protein. (145 aa)    
Predicted Functional Partners:
AFZ54573.1
PFAM: Protein of unknown function, DUF488; KEGG: cyb:CYB_0386 hypothetical protein; SPTR: Putative uncharacterized protein.
     0.985
AFZ54574.1
KEGG: slp:Slip_1902 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.745
AFZ54575.1
KEGG: dat:HRM2_14800 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.507
AFZ52718.1
PFAM: CRISPR-associated (Cas) DxTHG family; TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein; InterPro IPR011742:IPR013383; KEGG: cya:CYA_2548 CRISPR-associated TM1812 family protein; PFAM: CRISPR-associated protein, TM1812; SPTR: CRISPR-associated protein, TM1812 family; TIGRFAM: CRISPR-associated protein, TM1812; CRISPR-associated protein DxTHG, conserved site.
  
     0.414
AFZ54571.1
Urea ABC transporter membrane protein; PFAM: Branched-chain amino acid transport system / permease component; TIGRFAM: urea ABC transporter, permease protein UrtC; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR017778:IPR001851; KEGG: ter:Tery_0128 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; TIGRFAM: ABC transporter, urea, permease protein, UrtC.
       0.406
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.