STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ54693.1PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: cya:CYA_2057 M28A family peptidase; PFAM: Peptidase M28; SPTR: Peptidase, M28A family. (281 aa)    
Predicted Functional Partners:
AFZ54305.1
Phospholipase D/Transphosphatidylase; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: cyc:PCC7424_3083 helix-hairpin-helix motif protein; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Helix-hairpin-helix motif protein.
    
 0.639
AFZ52474.1
Small GTP-binding protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697); TIGRFAM: small GTP-binding protein domain; COGs: COG1100 GTPase SAR1 and related small G protein; InterPro IPR002917:IPR005225; KEGG: cyc:PCC7424_1326 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Small GTP-binding protein; TIGRFAM: Small GTP-binding protein.
  
 
  0.563
AFZ52971.1
Small GTP-binding protein; PFAM: GTPase of unknown function; Domain of unknown function (DUF697); TIGRFAM: small GTP-binding protein domain; COGs: COG1100 GTPase SAR1 and related small G protein; InterPro IPR005225:IPR002917; KEGG: cyc:PCC7424_1616 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Genome sequencing data, contig C247; TIGRFAM: Small GTP-binding protein.
    
  0.505
AFZ54692.1
PFAM: 3'-5' exonuclease; COGs: COG0349 Ribonuclease D; InterPro IPR002562; KEGG: cyc:PCC7424_5140 cell divisionFtsK/SpoIIIE; PFAM: 3'-5' exonuclease; SMART: 3'-5' exonuclease; SPTR: Putative uncharacterized protein.
       0.505
AFZ54966.1
KEGG: sli:Slin_2640 hypothetical protein; SPTR: Putative uncharacterized protein.
    
  0.505
AFZ54694.1
Hypothetical protein; KEGG: ote:Oter_2736 beta strand repeat-containing protein; SPTR: Putative uncharacterized protein.
       0.488
AFZ54670.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: cyh:Cyan8802_1743 AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase central domain protein.
  
  
 0.477
AFZ55069.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003593:IPR003959; KEGG: mar:MAE_26800 AAA famiry ATPase central region; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA famiry ATPase central region.
  
  
 0.473
AFZ54446.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
 0.421
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.