STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ54795.1NERD domain protein; PFAM: Pentapeptide repeats (8 copies); Nuclease-related domain; Type III restriction enzyme, res subunit; COGs: COG3972 Superfamily I DNA and RNA helicase; InterPro IPR011528:IPR001646; KEGG: cyh:Cyan8802_3670 pentapeptide repeat protein; PFAM: NERD; Pentapeptide repeat; SPTR: Pentapeptide repeat protein. (803 aa)    
Predicted Functional Partners:
AFZ55301.1
PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: cyt:cce_1820 small mechanosensitive ion channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative uncharacterized protein.
  
     0.675
AFZ55300.1
PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: cyt:cce_1819 hypothetical protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive (MS) ion channel.
  
     0.628
AFZ52456.1
KEGG: cyc:PCC7424_2162 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.574
AFZ52889.1
PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; COGs: COG0381 UDP-N-acetylglucosamine 2-epimerase; InterPro IPR003331; KEGG: cyt:cce_3663 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; PRIAM: UDP-N-acetylglucosamine 2-epimerase; SPTR: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
   
    0.573
AFZ52328.1
KEGG: cyt:cce_0907 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.554
AFZ53005.1
KEGG: cyc:PCC7424_1938 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.528
AFZ54695.1
KEGG: syn:slr7023 hypothetical protein; SPTR: Slr7023 protein.
 
     0.526
AFZ54928.1
KEGG: cyt:cce_1563 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.517
AFZ52725.1
Protein of unknown function DUF324; PFAM: RAMP superfamily; InterPro IPR005537; KEGG: syn:sll7066 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Putative uncharacterized protein.
  
     0.504
AFZ52327.1
KEGG: cyc:PCC7424_1460 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.502
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.