STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ54850.1KEGG: cyn:Cyan7425_0890 hypothetical protein; SPTR: Putative uncharacterized protein. (102 aa)    
Predicted Functional Partners:
AFZ54020.1
KEGG: cyc:PCC7424_3400 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.763
AFZ53544.1
KEGG: cyc:PCC7424_3400 hypothetical protein; SPTR: Ssr1562 protein.
  
     0.750
AFZ52769.1
KEGG: ava:Ava_1703 hypothetical protein; SPTR: Alr3994 protein.
  
     0.745
AFZ54741.1
CRISPR-associated protein, Cas6 family; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6; COGs: COG5551 conserved hypothetical protein; InterPro IPR010156; KEGG: cyh:Cyan8802_4561 CRISPR-associated protein Cas6; SPTR: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein, Cas6.
  
     0.734
AFZ52309.1
KEGG: cyc:PCC7424_3399 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.688
AFZ54423.1
KEGG: mar:MAE_24280 hypothetical protein; SPTR: Similar to tr|Q8YRD1|Q8YRD1.
  
     0.656
AFZ52880.1
PFAM: Ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); InterPro IPR001015; KEGG: cyc:PCC7424_0668 ferrochelatase; PFAM: Ferrochelatase; SPTR: Ferrochelatase; Belongs to the ferrochelatase family.
  
     0.641
AFZ55215.1
KEGG: ana:all4615 hypothetical protein; SPTR: All4615 protein.
  
     0.638
AFZ54505.1
KEGG: cyc:PCC7424_3354 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.634
AFZ54985.1
KEGG: mar:MAE_35260 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.619
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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