STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ55190.1PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; InterPro IPR012657; KEGG: ana:all1091 hypothetical protein; SPTR: All1091 protein; TIGRFAM: Conserved hypothetical protein CHP02436. (118 aa)    
Predicted Functional Partners:
AFZ55191.1
Sodium/proton antiporter, CPA1 family; PFAM: Universal stress protein family; Sodium/hydrogen exchanger family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153:IPR006016; KEGG: ter:Tery_2353 hypothetical protein; PFAM: Cation/H+ exchanger; UspA; SPTR: Sodium/hydrogen exchanger; TC 2.A.36.
       0.610
AFZ55189.1
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cyt:cce_1569 sulfolipid sulfoquinovosyldiacylglycerol biosynthesis protein; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1.
       0.605
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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