STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ55400.1PFAM: Protein of unknown function (DUF1257); InterPro IPR009666; KEGG: cyt:cce_3653 hypothetical protein; PFAM: Protein of unknown function DUF1257; SPTR: Putative uncharacterized protein. (127 aa)    
Predicted Functional Partners:
AFZ54670.1
AAA ATPase central domain protein; PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0464 ATPase of the AAA+ class; InterPro IPR003959:IPR003593; KEGG: cyh:Cyan8802_1743 AAA ATPase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase central domain protein.
 
   
 0.765
AFZ53832.1
KEGG: syp:SYNPCC7002_A2279 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
AFZ52976.1
KEGG: cyt:cce_3226 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.748
rpmF
PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: syf:Synpcc7942_0997 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.747
AFZ54562.1
PFAM: Hsp70 protein; COGs: COG0443 Molecular chaperone; InterPro IPR013126; KEGG: cyc:PCC7424_0171 heat shock protein 70; PFAM: Heat shock protein 70; SPTR: Heat shock protein 70.
  
     0.737
AFZ54453.1
PFAM: Hypothetical chloroplast protein Ycf34; InterPro IPR019656; KEGG: cyp:PCC8801_1971 Ycf34; SPTR: Putative uncharacterized protein.
  
     0.730
AFZ54906.1
PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: cyu:UCYN_09330 hypothetical protein; PFAM: Organic solvent tolerance-like, N-terminal; SPTR: OstA-like protein.
  
     0.718
AFZ52426.1
KEGG: mar:MAE_10050 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.711
AFZ52495.1
KEGG: cyc:PCC7424_4932 hypothetical protein; SPTR: Similar to tr|P74379|P74379.
  
     0.699
AFZ55399.1
Ferredoxin; COGs: COG1141 Ferredoxin; KEGG: cyp:PCC8801_1897 ferredoxin; SPTR: Ferredoxin.
 
     0.680
Your Current Organism:
Cyanobacterium aponinum
NCBI taxonomy Id: 755178
Other names: C. aponinum PCC 10605, Cyanobacterium aponinum PCC 10605, Cyanobacterium sp. PCC 10605
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