STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEY65525.1Hypothetical protein. (204 aa)    
Predicted Functional Partners:
AEY65526.1
Phage protein D; PFAM: Phage late control gene D protein (GPD).
 
   0.982
AEY65529.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
 
   0.970
AEY65523.1
PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
   0.960
AEY65527.1
Hypothetical protein; PFAM: Phage-related baseplate assembly protein.
 
    0.956
AEY65530.1
PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
 
 
 0.945
AEY65519.1
PFAM: Phage tail sheath protein.
 
 
 0.936
AEY65531.1
Hypothetical protein.
 
 
 0.935
AEY65521.1
Hypothetical protein.
 
    0.934
AEY65522.1
Hypothetical protein; Manually curated; non-canonical start codon.
 
     0.928
AEY65520.1
PFAM: T4-like virus tail tube protein gp19; TIGRFAM: conserved hypothetical phage tail region protein.
 
   0.924
Your Current Organism:
Clostridium sp. BNL1100
NCBI taxonomy Id: 755731
Other names: C. sp. BNL1100
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