STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA42020.1InterPro IPR012600:IPR005536; KEGG: pgn:PGN_1970 arginine-specific cysteine proteinase RgpA; PFAM: Propeptide, peptidase C25; Peptidase C25, C-terminal Ig-like domain; PRIAM: Gingipain R; SPTR: Putative Agmatine deiminase; PFAM: Propeptide_C25; Peptidase family C25; Peptidase family C25, C terminal ig-like domain. (739 aa)    
Predicted Functional Partners:
AEA44723.1
COGs: COG2356 Endonuclease I; InterPro IPR007346; KEGG: fps:FP0696 extracellular ribonuclease precursor; PFAM: Endonuclease I; SPTR: Putative uncharacterized protein; PFAM: Endonuclease I.
  
     0.538
AEA45185.1
PKD domain containing protein; InterPro IPR000601; KEGG: fps:FP0087 glycosyl hydrolase; PFAM: PKD; SMART: PKD; SPTR: Glycosyl hydrolase; PFAM: PKD domain.
  
     0.533
AEA42018.1
KEGG: cth:Cthe_0663 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.507
AEA42019.1
HI0933 family protein; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: fjo:Fjoh_1396 hypothetical protein; PFAM: HI0933-like protein; SPTR: HI0933 family protein; TIGRFAM: HI0933-like protein; PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family.
       0.507
AEA45706.1
Peptidase C10 streptopain; InterPro IPR000200; KEGG: glo:Glov_2340 peptidase C10 streptopain; PFAM: Peptidase C10, streptopain; SPTR: Peptidase C10 streptopain; PFAM: Peptidase C10 family.
  
     0.487
AEA44721.1
Hypothetical protein; KEGG: eat:EAT1b_1831 endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase.
  
     0.455
AEA42021.1
KEGG: rbi:RB2501_07230 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.441
AEA42986.1
Hypothetical protein; KEGG: fjo:Fjoh_1189 regulator of chromosome condensation, RCC1; SPTR: Regulator of chromosome condensation, RCC1.
  
    0.421
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.