STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA42374.1COGs: COG3012 conserved hypothetical protein; KEGG: chu:CHU_2091 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SEC-C motif. (127 aa)    
Predicted Functional Partners:
AEA42375.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fps:FP0482 penicillin-binding protein; PFAM: Beta-lactamase-related; SPTR: Penicillin-binding protein 4*; PFAM: Beta-lactamase.
       0.773
AEA42376.1
Hypothetical protein; KEGG: pfa:PFF0765c conserved Plasmodium protein, unknown function; SPTR: Putative uncharacterized protein.
       0.498
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.