STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA42984.1Delta-60 repeat-containing protein; InterPro IPR013431; KEGG: ote:Oter_0312 hypothetical protein; SPTR: Cell wall associated biofilm protein; TIGRFAM: Delta-60 repeat; TIGRFAM: delta-60 repeat domain. (1094 aa)    
Predicted Functional Partners:
AEA45955.1
Delta-60 repeat-containing protein; InterPro IPR013431; KEGG: cch:Cag_0738 VCBS; SPTR: Putative uncharacterized protein; TIGRFAM: Delta-60 repeat; TIGRFAM: delta-60 repeat domain.
  
     0.691
AEA45438.1
Delta-60 repeat-containing protein; InterPro IPR013431; KEGG: sli:Slin_3915 hypothetical protein; SPTR: VCBS; TIGRFAM: Delta-60 repeat; TIGRFAM: delta-60 repeat domain.
  
     0.594
AEA43742.1
Delta-60 repeat-containing protein; InterPro IPR013431; KEGG: cph:Cpha266_2319 FG-GAP repeat-containing protein; SPTR: FG-GAP repeat protein; TIGRFAM: Delta-60 repeat; TIGRFAM: delta-60 repeat domain.
  
     0.583
AEA42985.1
InterPro IPR006558; KEGG: sli:Slin_4723 NHL repeat containing protein; SMART: LamG-like jellyroll fold; SPTR: NHL repeat containing protein.
 
  
0.575
AEA43525.1
Regulatory protein ArsR; InterPro IPR001845; KEGG: gfo:GFO_2196 transcription regulator ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Putative transcriptional regulator, ArsR family protein; PFAM: Bacterial regulatory protein, arsR family.
  
     0.454
AEA42983.1
Hypothetical protein; KEGG: api:100159478 similar to CG14608 CG14608-PB; SPTR: Histidinol phosphate phosphatase HisJ family.
       0.420
AEA44801.1
KEGG: cyn:Cyan7425_4251 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.414
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.