STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA43006.1Hypothetical protein; KEGG: pdi:BDI_1531 putative metal-dependent hydrolase; SPTR: Putative metal-dependent hydrolase. (228 aa)    
Predicted Functional Partners:
AEA43005.1
KEGG: aba:Acid345_4585 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DU1801).
       0.515
AEA43007.1
LytTr DNA-binding region; InterPro IPR007492; KEGG: sli:Slin_5746 response regulator receiver protein; PFAM: LytTr, DNA-binding domain; SPTR: Putative uncharacterized protein; PFAM: LytTr DNA-binding domain.
       0.497
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.