STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA43067.1PKD domain containing protein; COGs: COG3291 FOG: PKD repeat; InterPro IPR000601; KEGG: cpi:Cpin_6899 conserved repeat domain protein; PFAM: PKD; SMART: PKD; SPTR: Conserved repeat domain protein; PFAM: PKD domain. (1238 aa)    
Predicted Functional Partners:
AEA44384.1
Putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_6913 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.709
AEA45081.1
Putative membrane protein; InterPro IPR019861; KEGG: phe:Phep_3745 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.682
AEA45266.1
KEGG: fjo:Fjoh_1697 hypothetical protein; SPTR: Hypothetical lipoprotein.
  
     0.638
AEA43880.1
Putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_6900 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.621
AEA43496.1
Hypothetical protein; KEGG: chu:CHU_2225 gliding motility-related protein; adhesin AidA-related; SPTR: CHU large protein; gliding motility-related protein; possible adhesin AidA-related.
  
    0.555
AEA43498.1
Hypothetical protein; KEGG: chu:CHU_2225 gliding motility-related protein; adhesin AidA-related; SPTR: Possible filamentous hemagglutinin outer membrane protein.
  
    0.552
AEA42698.1
Putative membrane protein; InterPro IPR019861; KEGG: cpi:Cpin_6900 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.530
AEA43589.1
Peptidase M10A and M12B matrixin and adamalysin; InterPro IPR001818; KEGG: dfe:Dfer_1341 conserved repeat domain protein; PFAM: Peptidase M10, metallopeptidase; SPTR: Conserved repeat domain protein.
  
     0.528
AEA44334.1
Hypothetical protein; KEGG: chu:CHU_2225 gliding motility-related protein; adhesin AidA-related; SPTR: VCBS.
  
     0.520
AEA43065.1
COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: nve:NEMVE_v1g156669 hypothetical protein; PFAM: Homocysteine S-methyltransferase; PRIAM: Methionine synthase; SPTR: Predicted protein; PFAM: Homocysteine S-methyltransferase.
       0.512
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.