STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA43958.1KEGG: chu:CHU_1738 hypothetical protein; SPTR: Putative uncharacterized protein. (590 aa)    
Predicted Functional Partners:
AEA43870.1
Polysaccharide biosynthesis protein; InterPro IPR002797; KEGG: chu:CHU_2176 exporter of O-antigen and teichoic acid; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; PFAM: Polysaccharide biosynthesis protein.
  
    0.777
AEA42708.1
TonB-dependent receptor; InterPro IPR012910:IPR000531; KEGG: rmr:Rmar_2819 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Cna protein B-type domain.
  
     0.773
AEA43719.1
O-antigen polymerase; InterPro IPR007016; KEGG: chu:CHU_2177 ExoQ family/lipid A core O-antigen ligase; PFAM: O-antigen ligase-related; SPTR: Membrane protein of EXOQ family/lipid A core-O-antigen ligase; PFAM: O-Antigen ligase.
 
  
 0.773
AEA42705.1
KEGG: rmr:Rmar_2818 hypothetical protein; SPTR: Lipoprotein, putative.
  
     0.772
AEA42707.1
KEGG: rmr:Rmar_2818 hypothetical protein; SPTR: Lipoprotein, putative.
  
     0.772
AEA43141.1
KEGG: rmr:Rmar_2818 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.772
AEA44394.1
KEGG: chu:CHU_1548 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.771
AEA42392.1
KEGG: sli:Slin_1871 hypothetical protein; SPTR: Fibronectin type III domain protein.
  
     0.770
AEA43720.1
Lipopolysaccharide biosynthesis protein; InterPro IPR003856; KEGG: chu:CHU_2178 hypothetical protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Putative uncharacterized protein; PFAM: Chain length determinant protein.
 
     0.769
AEA42919.1
KEGG: chu:CHU_3259 hypothetical protein; SPTR: CHU large protein; uncharacterized.
  
     0.765
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.