STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA43965.1COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: pdi:BDI_2285 putative beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Putative beta-lactamase; PFAM: Beta-lactamase. (409 aa)    
Predicted Functional Partners:
lipB
Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.
       0.780
AEA43964.1
KEGG: phe:Phep_2190 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.703
AEA45333.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_2736 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; PFAM: Beta-lactamase; Belongs to the class-A beta-lactamase family.
  
     0.594
AEA43967.1
Membrane bound O-acyl transferase MBOAT family protein; COGs: COG1696 membrane protein involved in D-alanine export; InterPro IPR004299; KEGG: coc:Coch_0376 membrane bound O-acyl transferase MBOAT family protein; PFAM: Membrane bound O-acyl transferase, MBOAT; SPTR: Membrane bound O-acyl transferase MBOAT family protein; PFAM: MBOAT family; Belongs to the membrane-bound acyltransferase family.
  
    0.517
AEA44610.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fjo:Fjoh_2105 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Possible beta-lactamase; PFAM: Beta-lactamase; Domain of unknown function (DUF3471).
  
     0.494
AEA43968.1
KEGG: fps:FP1905 hypothetical protein; SPTR: Lipoprotein; PFAM: GDSL-like Lipase/Acylhydrolase.
       0.434
AEA43969.1
KEGG: coc:Coch_0377 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.434
AEA45500.1
Beta-N-acetylhexosaminidase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: fjo:Fjoh_4819 glycoside hydrolase family 3 protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Putative hydrolase/beta lactamase fusion protein; PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase.
 
  
 0.407
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.