STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA44000.1CMP/dCMP deaminase zinc-binding protein; COGs: COG0295 Cytidine deaminase; InterPro IPR002125; KEGG: fbc:FB2170_17371 cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase; PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric. (157 aa)    
Predicted Functional Partners:
AEA44675.1
COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: coc:Coch_1827 purine or other phosphorylase family 1; PFAM: Nucleoside phosphorylase; SPTR: Purine or other phosphorylase family 1; PFAM: Phosphorylase superfamily.
 
 
 0.972
tdk
COGs: COG1435 Thymidine kinase; HAMAP: Thymidine kinase, subgroup; InterPro IPR001267:IPR020634; KEGG: bth:BT_2275 thymidine kinase; PFAM: Thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; PFAM: Thymidine kinase.
 
  
 0.948
AEA44826.1
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
 
 
 0.945
AEA43491.1
COGs: COG0572 Uridine kinase; KEGG: dfe:Dfer_4546 phosphoribulokinase/uridine kinase; PRIAM: Uridine kinase; SPTR: Uridine kinase; PFAM: Phosphoribulokinase / Uridine kinase family.
    
 0.927
AEA43040.1
COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: fjo:Fjoh_1482 deoxynucleoside kinase; PFAM: Deoxynucleoside kinase; PRIAM: Deoxyadenosine kinase; SPTR: Deoxynucleoside kinase; PFAM: Deoxynucleoside kinase.
    
 0.916
surE
Multifunctional protein surE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.909
AEA44725.1
COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR006311; KEGG: fjo:Fjoh_3473 metallophosphoesterase; PFAM: Metallophosphoesterase; PRIAM: 5'-nucleotidase; SPTR: Possible secreted 5'-nucleotidase; PFAM: Calcineurin-like phosphoesterase; Belongs to the 5'-nucleotidase family.
    
 0.903
AEA44001.1
methylmalonyl-CoA mutase metallochaperone MeaB; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: pdi:BDI_3744 arginine/ornithine transport system ATPase; PFAM: ArgK protein; SPTR: LAO/AO transport system ATPase; TIGRFAM: ArgK protein; PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase.
       0.773
era
GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.747
glyQS
glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.706
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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