STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA44003.1KEGG: chu:CHU_0763 hypothetical protein; SPTR: Putative uncharacterized protein. (177 aa)    
Predicted Functional Partners:
AEA44534.1
Putative membrane protein; InterPro IPR019861; KEGG: sli:Slin_5231 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.734
AEA44255.1
KEGG: cat:CA2559_06580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.733
AEA44533.1
Sulphatase-modifying factor protein; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: cpi:Cpin_1181 protein of unknown function DUF323; PFAM: Sulphatase-modifying factor; SPTR: Putative membrane protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ.
  
     0.733
AEA42752.1
InterPro IPR000601; KEGG: cpi:Cpin_2588 PKD domain containing protein; SMART: PKD; SPTR: PKD domain containing protein.
  
     0.727
AEA43160.1
Hypothetical protein; InterPro IPR019734; KEGG: pdi:BDI_3149 TPR domain-containing protein; SPTR: Putative uncharacterized protein.
  
     0.727
AEA44275.1
InterPro IPR019852; KEGG: chu:CHU_0172 gliding motility-related protein; SPTR: Gliding motility-related protein; TIGRFAM: Gliding motility-associated protein, GldL; TIGRFAM: gliding motility-associated protein GldL.
  
     0.727
AEA42194.1
KEGG: fjo:Fjoh_1540 hypothetical protein; SPTR: Gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD.
  
     0.725
AEA44863.1
Putative membrane protein; InterPro IPR019861; KEGG: dfe:Dfer_3688 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.722
AEA43578.1
Hypothetical protein; KEGG: fjo:Fjoh_2248 TonB-dependent receptor; SPTR: Probable integral outer membrane protein.
  
     0.716
AEA45148.1
InterPro IPR003769; KEGG: fps:FP1679 hypothetical protein; PFAM: Adaptor protein ClpS, core; SPTR: ATP-dependent Clp protease adaptor protein ClpS; PFAM: ATP-dependent Clp protease adaptor protein ClpS.
  
     0.704
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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