STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA44559.1KEGG: cpc:Cpar_0309 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Tim44-like domain. (483 aa)    
Predicted Functional Partners:
AEA44558.1
COGs: COG4260 Putative virion core protein (lumpy skin disease virus); KEGG: cpi:Cpin_0766 putative virion core protein (lumpy skin disease virus)-like protein; SPTR: Putative uncharacterized protein; PFAM: SPFH domain / Band 7 family.
       0.690
AEA44557.1
KEGG: pdi:BDI_0258 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.531
AEA44556.1
Hypothetical protein; KEGG: aar:Acear_1389 AAA ATPase; SPTR: AAA ATPase.
       0.468
AEA44555.1
Hypothetical protein; KEGG: pdi:BDI_1148 UDP-N-acetylenolpyruvoylglucosamine reductase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase.
       0.456
AEA42148.1
Hypothetical protein; KEGG: cyt:cce_5091 hemolysin-type calcium-binding protein; SPTR: Na-Ca exchanger/integrin-beta4.
  
     0.400
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.