STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA44808.1KEGG: mar:MAE_61060 hyalin repeat-containing protein; SPTR: Putative uncharacterized protein. (557 aa)    
Predicted Functional Partners:
AEA42044.1
Outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: fps:FP1837 lipoprotein; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: Outer membrane assembly lipoprotein YfiO; TIGRFAM: outer membrane assembly lipoprotein YfiO.
   
 
 0.591
AEA45968.1
KEGG: cpi:Cpin_0142 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.591
AEA44807.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fba:FIC_01136 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
  
    0.556
AEA44809.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: dfe:Dfer_1794 OmpA/MotB domain protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: OmpA/MotB domain protein; PFAM: OmpA family.
  
    0.553
AEA44806.1
Histidine kinase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR019734:IPR003594:IPR001440; KEGG: fba:FIC_01135 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Tetratricopeptide repeat; SPTR: Two-component system sensor histidine kinase; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
    0.539
AEA42025.1
KEGG: pdi:BDI_0201 TPR domain-containing protein; SPTR: Putative uncharacterized protein.
  
    0.525
AEA44703.1
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641:IPR010827; KEGG: cpi:Cpin_2996 patatin; PFAM: Patatin; Surface antigen variable number; SPTR: Putative uncharacterized protein; PFAM: Patatin-like phospholipase.
  
 
 0.523
AEA42854.1
Surface antigen (D15); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184; KEGG: chu:CHU_0166 outer membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein, OMP85 family, putative.
  
 
 0.494
AEA43114.1
COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR000184:IPR016474; KEGG: phe:Phep_0986 outer membrane protein assembly complex, YaeT protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Outer membrane protein assembly complex, YaeT protein; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 0.494
AEA44104.1
Surface antigen (D15); InterPro IPR000184; KEGG: cpi:Cpin_3252 outer membrane protein; PFAM: Bacterial surface antigen (D15); SPTR: Putative uncharacterized protein; PFAM: Surface antigen.
  
 
 0.494
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.