STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA44982.1KEGG: fps:FP1570 hypothetical protein; SPTR: Putative uncharacterized protein. (206 aa)    
Predicted Functional Partners:
AEA44981.1
KEGG: fps:FP1571 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
  
 0.940
AEA44980.1
KEGG: cat:CA2559_11658 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
 
     0.931
AEA44979.1
Tetracycline regulation of excision, RteC; InterPro IPR018534; KEGG: fps:FP1540 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; PFAM: RteC protein.
 
     0.850
AEA43683.1
KEGG: fps:FP1571 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.801
AEA42581.1
KEGG: fps:FP1571 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.800
AEA44931.1
KEGG: fps:FP2295 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.800
AEA44956.1
KEGG: fps:FP1571 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.800
AEA43682.1
KEGG: fps:FP1539 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.772
AEA42583.1
KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein.
 
     0.767
AEA44930.1
KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein.
 
     0.767
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.