STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEA45182.1COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1571 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (805 aa)    
Predicted Functional Partners:
AEA42623.1
KEGG: sli:Slin_5987 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
AEA43504.1
Gloeo_Verruco repeat protein; KEGG: gvi:gll4064 hypothetical protein; SPTR: Peptidase S53 propeptide; TIGRFAM: Gloeo_Verruco repeat; TIGRFAM: Gloeo_Verruco repeat.
  
     0.438
AEA45185.1
PKD domain containing protein; InterPro IPR000601; KEGG: fps:FP0087 glycosyl hydrolase; PFAM: PKD; SMART: PKD; SPTR: Glycosyl hydrolase; PFAM: PKD domain.
  
     0.436
AEA46021.1
KEGG: fps:FP0278 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.413
AEA45183.1
Protein of unknown function DUF81; InterPro IPR002781; KEGG: fps:FP1502 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; PFAM: Sulfite exporter TauE/SafE.
       0.407
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.