STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA45182.1COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: sli:Slin_1571 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor. (805 aa)    
Predicted Functional Partners:
AEA46021.1
KEGG: fps:FP0278 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.504
AEA44523.1
KEGG: fbc:FB2170_07674 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.489
AEA42623.1
KEGG: sli:Slin_5987 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
AEA43504.1
Gloeo_Verruco repeat protein; KEGG: gvi:gll4064 hypothetical protein; SPTR: Peptidase S53 propeptide; TIGRFAM: Gloeo_Verruco repeat; TIGRFAM: Gloeo_Verruco repeat.
  
     0.438
AEA45185.1
PKD domain containing protein; InterPro IPR000601; KEGG: fps:FP0087 glycosyl hydrolase; PFAM: PKD; SMART: PKD; SPTR: Glycosyl hydrolase; PFAM: PKD domain.
  
     0.436
AEA42985.1
InterPro IPR006558; KEGG: sli:Slin_4723 NHL repeat containing protein; SMART: LamG-like jellyroll fold; SPTR: NHL repeat containing protein.
  
 
   0.431
AEA42071.1
TonB family protein; InterPro IPR008756:IPR006260; KEGG: dfe:Dfer_3381 TonB family protein; PFAM: Peptidase M56, BlaR1; SPTR: TonB-dependent receptor; TIGRFAM: TonB, C-terminal; PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
   
   0.417
AEA43097.1
KEGG: sli:Slin_6188 TonB family protein; SPTR: TonB family protein.
   
   0.417
AEA43098.1
TonB family protein; InterPro IPR006260; KEGG: dfe:Dfer_3381 TonB family protein; PFAM: TonB, C-terminal; SPTR: TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
   
   0.417
AEA43100.1
Hypothetical protein; KEGG: bth:BT_3896 TonB; SPTR: TonB; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
   
   0.417
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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