STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA45261.1Anti-anti-sigma factor; InterPro IPR002645:IPR003658; KEGG: chu:CHU_1913 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family. (112 aa)    
Predicted Functional Partners:
AEA43530.1
COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); KEGG: chu:CHU_3500 anti-sigma regulatory factor; SPTR: Anti-sigma regulatory factor.
 
 
 0.972
AEA43356.1
COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: zpr:ZPR_4458 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system sensor histidin [...]
  
  
 0.970
AEA45881.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR003661:IPR003594:IPR001789:IPR000014:IPR 013656; KEGG: cts:Ctha_0019 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-4; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: Multi-sensor hybrid histidine kinase; [...]
 
  
 0.928
AEA44442.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR010822:IPR001932; KEGG: chu:CHU_2179 sigma factor regulation protein; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-related; SPTR: Putative regulatory protein; PFAM: Stage II sporulation protein E (SpoIIE).
 
 
 0.887
rnz
Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
  
    0.802
AEA44011.1
Putative PAS/PAC sensor protein; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR000014:IPR001932:IPR013767:IPR010822; KEGG: drm:Dred_1841 stage II sporulation E family protein; PFAM: Sporulation stage II, protein E C-terminal; PAS fold; SMART: Protein phosphatase 2C-related; PAS; SPTR: Serine/threonine protein kinases; TIGRFAM: PAS; PFAM: Y_Y_Y domain; Stage II sporulation protein E (SpoIIE); PAS fold; TIGRFAM: PAS domain S-box.
 
 
 0.731
AEA42908.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR019734:IPR001932:IPR001440:IPR010822; KEGG: clj:CLJU_c28300 hypothetical protein; PFAM: Sporulation stage II, protein E C-terminal; Tetratricopeptide TPR-1; SMART: Protein phosphatase 2C-related; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinases, putative; PFAM: Tetratricopeptide repeat; Stage II sporulation protein E (SpoIIE).
 
 
 0.717
AEA43320.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR001440:IPR010822:IPR019734:IPR001932; KEGG: lil:LA_1422 serine/threonine kinase; PFAM: Sporulation stage II, protein E C-terminal; Tetratricopeptide TPR-1; SMART: Protein phosphatase 2C-related; Tetratricopeptide repeat; SPTR: Serine/threonine protein kinases, putative; PFAM: Stage II sporulation protein E (SpoIIE); Tetratricopeptide repeat.
 
 
 0.713
AEA43279.1
Protein serine/threonine phosphatase; COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterProIPR001440:IPR010822:IPR019734:IPR006597:IPR 001932; KEGG: ter:Tery_2811 tetratricopeptide TPR_2; PFAM: Tetratricopeptide TPR-1; Sporulation stage II, protein E C-terminal; SMART: Tetratricopeptide repeat; Sel1-like; Protein phosphatase 2C-related; SPTR: Serine/threonine protein kinases, putative; PFAM: Tetratricopeptide repeat; Stage II sporulation protein E (SpoIIE).
 
 
 0.711
AEA44788.1
Tyrosine lyase ThiH; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197:IPR010722:IPR012726; KEGG: fjo:Fjoh_1598 thiazole biosynthesis protein ThiH; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SPTR: Thiazole biosynthesis protein ThiH; TIGRFAM: Thiazole biosynthesis ThiH; PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH.
  
    0.706
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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