Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEA45305.1Transcriptional regulator, PadR family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fbc:FB2170_14378 putative PadR-family transcriptional regulatory protein; PFAM: Transcription regulator PadR N-terminal-like; SPTR: Putative uncharacterized protein; PFAM: Transcriptional regulator PadR-like family. (110 aa)    
Predicted Functional Partners:
AEA45304.1
Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: fjo:Fjoh_0196 phage shock protein C, PspC; PFAM: PspC; SPTR: Phage shock protein C, PspC; PFAM: PspC domain.
 
     0.904
AEA42101.1
Transcriptional regulator, PadR family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: sli:Slin_6512 transcriptional regulator, PadR-like family; PFAM: Transcription regulator PadR N-terminal-like; SPTR: Conserved protein; PFAM: Transcriptional regulator PadR-like family.
  
     0.424
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
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