STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA45719.1Hypothetical protein; KEGG: pam:PANA_2280 RfbC; SPTR: RfbC. (126 aa)    
Predicted Functional Partners:
AEA45718.1
Peptidase C1A papain; COGs: COG4870 Cysteine protease; InterPro IPR000668; KEGG: dfe:Dfer_1726 peptidase C1A papain; PFAM: Peptidase C1A, papain C-terminal; SMART: Peptidase C1A, papain C-terminal; SPTR: Peptidase C1A papain; PFAM: Papain family cysteine protease.
       0.773
AEA45720.1
Hypothetical protein; KEGG: tet:TTHERM_00790480 Helicase conserved C-terminal domain containing protein; SPTR: Helicase conserved C-terminal domain containing protein.
       0.675
AEA45717.1
KEGG: fps:FP0040 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.636
AEA45716.1
Galanin; KEGG: pmf:P9303_21011 galanin; SPTR: Possible Galanin; PFAM: Protein of unknown function (DUF3137).
       0.543
AEA45721.1
Integral membrane sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR019734:IPR003661:IPR003594:IPR001789:IPR 018060:IPR001440:IPR000005; KEGG: rbi:RB2501_14219 putative two-component system sensor kinase/response regulator fusion protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide TPR-1; Signal transduction response regulator, receiver domain; Helix-turn-helix, AraC type; SMART: Signal transduction response regulator, receiver domain; ATPase- [...]
       0.424
Your Current Organism:
Fluviicola taffensis
NCBI taxonomy Id: 755732
Other names: CFB group bacterium RW262, F. taffensis DSM 16823, Fluviicola taffensis DSM 16823, Fluviicola taffensis RW262, Fluviicola taffensis str. DSM 16823, Fluviicola taffensis strain DSM 16823
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.