STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGK90636.1PFAM: Plasmid stabilisation system; KEGG: ava:Ava_4655 hypothetical protein. (92 aa)    
Predicted Functional Partners:
EGK90635.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.934
EGK88905.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.698
EGK85649.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 0.698
EGK84814.1
Helix-turn-helix domain protein; Manually curated; PFAM: Helix-turn-helix type 3; KEGG: npu:Npun_R4358 helix-turn-helix domain-containing protein; SMART: Helix-turn-helix type 3.
   
 0.681
EGK84815.1
KEGG: npu:Npun_R4358 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
   
 0.681
EGK89236.1
Helix-turn-helix domain protein; KEGG: cyn:Cyan7425_0143 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
   
 0.681
EGK88123.1
Helix-turn-helix domain protein; KEGG: dev:DhcVS_264 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
   
 0.681
EGK90315.1
Helix-turn-helix domain protein; KEGG: ava:Ava_C0229 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
   
 0.681
EGK89367.1
NC domain protein; PFAM: NC; KEGG: cyh:Cyan8802_4375 hypothetical protein.
  
     0.621
EGK84205.1
KEGG: nwa:Nwat_2947 hypothetical protein.
  
  
 0.618
Your Current Organism:
Microcoleus vaginatus
NCBI taxonomy Id: 756067
Other names: M. vaginatus FGP-2, Microcoleus vaginatus FGP-2
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