STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGK85691.1KEGG: ter:Tery_3752 hypothetical protein. (97 aa)    
Predicted Functional Partners:
EGK87656.1
KEGG: ava:Ava_0935 hypothetical protein.
 
     0.777
EGK89644.1
KEGG: npu:Npun_F4992 cytochrome c, class I; manually curated; PFAM: Cytochrome c, class I.
  
     0.774
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.774
EGK84909.1
KEGG: cyj:Cyan7822_2890 CO2 hydration protein; TIGRFAM: CO2 hydration; PFAM: CO2 hydration.
  
     0.773
EGK85784.1
KEGG: ter:Tery_0216 AbrB family transcriptional regulator.
  
     0.772
EGK89140.1
Protein of unknown function DUF2518; KEGG: ter:Tery_3998 hypothetical protein; manually curated; PFAM: Protein of unknown function DUF2518.
  
     0.768
EGK84319.1
KEGG: ter:Tery_1859 transcriptional regulator AbrB.
  
     0.768
EGK88782.1
PFAM: Protein of unknown function DUF1825; KEGG: ava:Ava_0927 hypothetical protein.
  
     0.767
EGK90326.1
KEGG: naz:Aazo_4081 CO2 hydration protein; TIGRFAM: CO2 hydration; PFAM: CO2 hydration.
  
     0.767
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.764
Your Current Organism:
Microcoleus vaginatus
NCBI taxonomy Id: 756067
Other names: M. vaginatus FGP-2, Microcoleus vaginatus FGP-2
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