STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylACOGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR012307: IPR001998: IPR013452; KEGG: plm:Plim_1287 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; Belongs to the xylose isomerase family. (436 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484: IPR018485: IPR006000; KEGG: plm:Plim_0722 xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; SPTR: Xylulose kinase; TIGRFAM: Xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase.
 
 
 0.962
ADY58905.1
Fructokinase; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ttr:Tter_0164 ROK family protein; PFAM: ROK; PRIAM: Fructokinase; SPTR: ROK family protein; PFAM: ROK family.
    
 0.919
ADY60437.1
COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR001395; KEGG: pat:Patl_2877 aldehyde reductase; PFAM: Aldo/keto reductase; PRIAM: Aldehyde reductase; SPTR: Aldehyde reductase; PFAM: Aldo/keto reductase family.
     
 0.908
ADY59949.1
L-iditol 2-dehydrogenase; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154: IPR013149; KEGG: rba:RB5948 Zn-dependent alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; PRIAM: L-iditol 2-dehydrogenase; SPTR: Probable alcohol dehydrogenase (Zn-dependent); PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
     
 0.906
ADY60275.1
Glucokinase; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: plm:Plim_2404 ROK family protein; PFAM: ROK; PRIAM: Glucokinase; SPTR: ROK family protein; PFAM: ROK family.
    
 0.838
glk
Glucokinase; COGs: COG0837 Glucokinase; InterPro IPR003836; KEGG: gvi:gll1169 glucokinase; PFAM: Glucokinase; PRIAM: Glucokinase; SPTR: Glucokinase; TIGRFAM: Glucokinase; PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
     
 0.813
ADY57636.1
KEGG: mhy:mhp529 hypothetical protein; SPTR: Odorant receptor.
       0.714
ADY59773.1
Sedoheptulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484; KEGG: tva:TVAG_320420 FGGY family of carbohydrate kinases, N-terminal domain containing protein; PFAM: Carbohydrate kinase, FGGY, N-terminal; PRIAM: Sedoheptulokinase; SPTR: Sugar (Pentulose and hexulose) kinases; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
 
  
 0.534
ADY61342.1
Glycoside hydrolase family 2 sugar binding protein; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104: IPR006102: IPR006710; KEGG: rba:RB3405 putative hydrolase; PFAM: Glycoside hydrolase family 2, carbohydrate-binding; Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 43; SPTR: Putative hydrolase; PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 43; Glycosyl hydrolases family 2, sugar binding domain.
  
  
 0.515
ADY57634.1
KEGG: plm:Plim_3594 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.498
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
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