STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADY57640.1Amylosucrase; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: rba:RB5196 alpha-amylase, amylosucrase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Amylosucrase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Alpha-amylase, amylosucrase; PFAM: Alpha amylase, catalytic domain. (655 aa)    
Predicted Functional Partners:
ADY59049.1
COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: rba:RB9535 amino acid permease homolog YkbA; PFAM: Amino acid permease domain; SPTR: Amino acid permease homolog ykbA; PFAM: Amino acid permease.
   
 0.933
ADY61407.1
Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR004841; KEGG: rba:RB950 amino acid transporter; PFAM: Amino acid permease domain; SPTR: Amino acid transporter; PFAM: Amino acid permease; TC 2.A.3.
   
 0.933
ADY58999.1
InterPro IPR013148: IPR001362; KEGG: rba:RB5832 hypothetical protein; PFAM: Glycosyl hydrolases family 32, N-terminal; SMART: Glycoside hydrolase, family 32; SPTR: Putative uncharacterized protein; PFAM: Glycosyl hydrolases family 32 N-terminal domain.
  
 
 0.927
ADY57639.1
Sucrose-phosphate synthase; COGs: COG0438 Glycosyltransferase; InterPro IPR001296: IPR006380: IPR012822: IPR006379: IPR 012821; KEGG: rba:RB5197 sucrose-phosphate synthase 1; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria; Glycosyl transferase, group 1; PRIAM: Sucrose-phosphate synthase., Sucrose-phosphate phosphatase; SPTR: Sucrose-phosphate synthase 1; TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase domain; HAD-superfamily hydrolase, subfamily IIB; Sucrose phosphate synthase, sucrose phosphatase-like domain; PFAM: Sucrose synthase; Glycosyl transferases gro [...]
 
 
 
 0.912
ADY57638.1
HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR006380: IPR006379; KEGG: rba:RB5200 alpha-amylase; PFAM: Sucrose-6F-phosphate phosphohydrolase, plant/cyanobacteria; SPTR: Alpha-amylase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Sucrose-6F-phosphate phosphohydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB.
 
   
 0.709
glgA
Glycogen synthase (ADP-glucose); Synthesizes alpha-1,4-glucan chains using ADP-glucose.
  
  
 0.672
ADY61061.1
Isoamylase; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR006589: IPR004193: IPR006047; KEGG: rba:RB4894 glycogen operon protein GlgX-2; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal; PRIAM: Isoamylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Glycogen operon protein glgX-2; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen debranching enzyme GlgX.
 
  
 0.650
ADY60231.1
Isoamylase; COGs: COG1523 Type II secretory pathway pullulanase PulA and related glycosidase; InterPro IPR011837: IPR006589: IPR004193: IPR006047; KEGG: plm:Plim_2700 glycogen debranching enzyme GlgX; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Isoamylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Glycogen debranching enzyme GlgX; TIGRFAM: Glycogen debranching enzyme GlgX; PFAM: Alpha amylase, catalytic domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); TIGRFAM: glycogen deb [...]
 
  
 0.644
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
  
 0.617
ADY57641.1
KEGG: plm:Plim_2869 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.596
Your Current Organism:
Rubinisphaera brasiliensis
NCBI taxonomy Id: 756272
Other names: Planctomyces brasiliensis ATCC 49424, Planctomyces brasiliensis DSM 5305, Planctomyces brasiliensis str. DSM 5305, Planctomyces brasiliensis strain DSM 5305, R. brasiliensis DSM 5305, Rubinisphaera brasiliensis DSM 5305
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.